Co-crystal structure of Inhibitor compound in complex with human PPARdelta LBD
Lakshminarasimhan, A., Rani, S.T., Senaiar, R.S., Krishnamurthy, N.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peroxisome proliferator-activated receptor delta | 275 | Homo sapiens | Mutation(s): 0  Gene Names: PPARD, NR1C2, PPARB | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q03181 (Homo sapiens) Explore Q03181  Go to UniProtKB:  Q03181 | |||||
PHAROS:  Q03181 GTEx:  ENSG00000112033  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q03181 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
1KF (Subject of Investigation/LOI) Query on 1KF | C [auth A], D [auth B] | (3R)-3-methyl-6-[2-[[5-methyl-2-[4-(trifluoromethyl)phenyl]imidazol-1-yl]methyl]phenoxy]hexanoic acid C25 H27 F3 N2 O3 FMOPHFSPINWSOV-QGZVFWFLSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 39.687 | α = 90 |
b = 74.991 | β = 97.89 |
c = 96.341 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
CrystalClear | data reduction |
Aimless | data scaling |
MOLREP | phasing |